Comparing Clustering Algorithms based on Structural Similarity

Nassim Sohaee and Christian V. Forst

Keywords

PPI network, clustering, affinity

Abstract

In this paper we will introduce a new metric to compare two biological clusters. This metric measures both structural and node similarity of two clusters. We replace Neighborhood Affinity function by this metric and show that some of the previously known matched clusters are showing a very low structural similarity.

Important Links:

• DOI: 10.2316/P.2011.753-029
• From Proceeding (753) Computational Intelligence and Bioinformatics / 755: Modelling, Simulation, and Identification - 2011

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